Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154254g00001 TGGCAAGCTAAAGAGCTTCTTGTTCACCTTGAGAGTATGCTGGCCAATGATCCTGTAGTAGTTAAAAGGGGAGAGCATATTGTTGAAGTAAAGCCTCAGGGTGTGAGCAAAGGTAAAGTAGTGGAAGAGCTTATATCAACCATGAGGAATGAAGGGAAGTCACCAGATTTTCTGCTATGCATAGGAGATGATAGATCA 198 0.4242 WQAKELLVHLESMLANDPVVVKRGEHIVEVKPQGVSKGKVVEELISTMRNEGKSPDFLLCIGDDRS 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154254g00001 66 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 1 66 - -
Trme154254g00001 66 Gene3D - 2 66 IPR023214 -
Trme154254g00001 66 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 66 IPR001830 GO:0003824|GO:0005992
Trme154254g00001 66 SUPERFAMILY HAD-like 9 65 IPR036412 -
Trme154254g00001 66 Pfam Trehalose-phosphatase 1 66 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme154254g00001 Trme-Chr154254 3 535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154254g00001 1 66 Trehalose Biosynthesis Gene Families AT2G18700 85.075 8.39e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme154254g00001 K16055 - oeu:111402193 117.472