Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154073g00001 ATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACYGCATCCAATGAAGGAAMTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCAATGGGAATCAAGATCACTGCCCAGGGACTTGAACATGCTATTGCCGGCGCTAGTTTATATGTGGTGAAGCCTGATGATGATTTGGAGTATATTAAAAAGGC 209 0.4115 MQGPIVTTIRALLTXHPMKEJRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKA 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154073g00001 70 Gene3D Translation factors 1 70 - -
Trme154073g00001 70 SUPERFAMILY Translation proteins 2 58 IPR009000 -
Trme154073g00001 70 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 3 69 IPR015760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme154073g00001 Trme-Chr154073 1 456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154073g00001 1 70 Eukaryotic Initiation Factors Gene Family AT1G76810 78.571 7.54e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme154073g00001 K03243 - gmx:100814640 124.79