Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154068g00001 ATGAACAAGAGTAGTGTGGATGATGTTGTACTTGTTGGTGGATCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAAGACTTTTTTAAGAGAAAAGACCTTTGCAGTAGCATCAATCCGGATGAGGCTGTTGCTTATGGTGCAGCCATTCAAGCTGCTTTGCTTTGTGAAGGTATTAAGAATATTCCAAACTTGGTGCTGCAAGATGTTACTCCATTGTCTCTTGGAATCTTTGTAAAAGGAGATATCATGAGTGTAGGGATTCCTAAGAATTCTACCATTNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTGTTTATGAGGGTGAGAGAATGGTTGCGAGTGAGAACAACTTGCTTGGTTTGTTTAATCTCTCAGTTCGCCCTGCACCTCGTGGACTTCCTATCCAG 441 0.3605 MNKSSVDDVVLVGGSSRIPKVQQLLQDFFKRKDLCSSINPDEAVAYGAAIQAALLCEGIKNIPNLVLQDVTPLSLGIFVKGDIMSVGIPKNSTIXXXXXXXXXXXXXXXXXXXXXVYEGERMVASENNLLGLFNLSVRPAPRGLPIQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154068g00001 147 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Trme154068g00001 147 Pfam Hsp70 protein 2 145 IPR013126 GO:0005524|GO:0140662
Trme154068g00001 147 Coils Coil 94 94 - -
Trme154068g00001 147 SUPERFAMILY Actin-like ATPase domain 2 55 IPR043129 -
Trme154068g00001 147 Gene3D - 36 53 - -
Trme154068g00001 147 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 57 147 IPR029047 -
Trme154068g00001 147 Gene3D - 1 35 - -
Trme154068g00001 147 PANTHER HEAT SHOCK PROTEIN 70KDA 1 145 IPR013126 GO:0005524|GO:0140662
Trme154068g00001 147 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 65 145 IPR029047 -
Trme154068g00001 147 PRINTS 70kDa heat shock protein signature 6 22 - -
Trme154068g00001 147 PRINTS 70kDa heat shock protein signature 64 83 - -
Trme154068g00001 147 PRINTS 70kDa heat shock protein signature 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme154068g00001 Trme-Chr154068 35 475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154068g00001 1 145 Calmodulin-binding Proteins AT3G12580 58.503 2.88e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme154068g00001 K03283 - gmx:102667578 171.014