Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme153914g00001 GGTAAGGGTACCGGAAGTTTCGGTAAGAGAAGGAACAAGACTCACACACTCTGTGTGAGGTGCGGCCGCCGCAGTTTCCACCTCCAGAAAAGTCGGTGCTCCGCCTGTGCATATCCTGCTGCTCGTGTCAGGAAATATAACTGGAGTGTTAAGGCAATCCGTAGAAAGACCACTGGAACTGGTAGGATGAGGTACTTGCGTAACGTTCCTCGCCGATTCAAGAGTGGCTTCAGAGAGGGTATTTATTCTTTTTTCTTTGCTAATGTATTATAA 273 0.4799 GKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGIYSFFFANVL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme153914g00001 90 FunFam Ribosomal protein L37 1 84 - -
Trme153914g00001 90 Pfam Ribosomal protein L37e 2 52 IPR001569 GO:0003735|GO:0005840|GO:0006412
Trme153914g00001 90 SUPERFAMILY Zn-binding ribosomal proteins 2 54 IPR011332 GO:0006412
Trme153914g00001 90 PANTHER 60S RIBOSOMAL PROTEIN L37 2 81 - -
Trme153914g00001 90 Hamap 50S ribosomal protein L37e [rpl37e]. 1 52 IPR001569 GO:0003735|GO:0005840|GO:0006412
Trme153914g00001 90 ProSitePatterns Ribosomal protein L37e signature. 3 22 IPR018267 GO:0003735|GO:0005840|GO:0006412
Trme153914g00001 90 Gene3D - 1 84 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme153914g00001 2 83 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 90.244 9.95e-51 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme153914g00001 K02922 - han:110921716 172.17