Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15329g00001 ATGAAAATGCATTTGTTGAACACCAAAGAGTGCATAGCTCCACCAAGGAATGATGTCCAACTTCTTAAAGAAATCATCAAATGTGTGTTGATGAATTTGAACAATAAGCACCTAGTTAGCTCAAAAGGGCTCATTGGAATTGACAAACCAATGGCACATCTCAAATCATTGTTAAGCGACGAGTCAGAAGATGTTCGTGTTGTTGGGATTTGGGGTATGGGCGGTATTGGCAAGACAACCCTTGCAGAAGAGGTATTTCACCAACTACAATCTGAGTATGACAGTTATTGTTTTTTAGTGAACATAAGGGAAGAATCAGCAAAACATGGAATGGTTTTCTTAAAAGAAAAACTTGTTTCCGCACTATTAGATGAAGATGTAAAAGTTGACACTGCAAATGGATTGCCTCGTTATGTTGAAATGAGGATTCGTCGCATGAAAGTTCTTATTGTTTTAGATGATGTGAGTGATTTTGATCAACTTGAA 486 0.3724 MKMHLLNTKECIAPPRNDVQLLKEIIKCVLMNLNNKHLVSSKGLIGIDKPMAHLKSLLSDESEDVRVVGIWGMGGIGKTTLAEEVFHQLQSEYDSYCFLVNIREESAKHGMVFLKEKLVSALLDEDVKVDTANGLPRYVEMRIRRMKVLIVLDDVSDFDQLE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15329g00001 162 PRINTS Disease resistance protein signature 142 156 - -
Trme15329g00001 162 PRINTS Disease resistance protein signature 67 82 - -
Trme15329g00001 162 Gene3D - 16 162 IPR027417 -
Trme15329g00001 162 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 162 IPR044974 GO:0006952
Trme15329g00001 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 162 IPR027417 -
Trme15329g00001 162 Pfam NB-ARC domain 51 159 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15329g00001 Trme-Chr15329 1 804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15329g00001 16 158 WRKY Transcription Factor Family AT4G12020 32.639 2.21e-18 79.3