Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme153198g00001 ATGCAGGGTTACCTTGATCCAGAGTACTTCTTAACTCATACATTGACCGACAAGAGTGATGTTTACAGTCTTGGTGTTGTGTTTCTTGAACTTTTGACCGGAATGCATCCTATCTCACATGGCAAAAACATTGTTAGAGAG 141 0.4043 MQGYLDPEYFLTHTLTDKSDVYSLGVVFLELLTGMHPISHGKNIVRE 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme153198g00001 47 Pfam Protein tyrosine and serine/threonine kinase 4 40 IPR001245 GO:0004672|GO:0006468
Trme153198g00001 47 Gene3D Transferase(Phosphotransferase) domain 1 1 47 - -
Trme153198g00001 47 PANTHER RECEPTOR-LIKE PROTEIN 55 3 47 - -
Trme153198g00001 47 ProSiteProfiles Protein kinase domain profile. 1 47 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme153198g00001 47 SUPERFAMILY Protein kinase-like (PK-like) 3 44 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme153198g00001 Trme-Chr153198 179 412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme153198g00001 3 47 Receptor kinase-like Gene Family AT5G01950 93.333 5.52e-25 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Trme153198g00001 PK_Tyr_Ser-Thr 1.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme153198g00001 - - ini:109162753 96.6709