Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme153122g00001 TCCCTTACTGAGTGGACCGAGAAGGAGACATTTGTTCTTCTTGATGCGTGGGGTGATCGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATCTGATGAATGGCAACAAGTTGCAGAAAAGGTATCAGAAGTTTCAAGAGTTGAAAGAACAGGTACTCAGTGTAGAAATCGTTTAGATACATTGAAGAAAAAATACAAAAAGGACAAGATTAAGTTTTCAGAAATGGGTGGTGGAGATAGAAAATGGGTTTATTTTAAAAAGATGGATAAGCTAATGTCTTCTCCACCACAACAGGCAGGTTTCTCTTGTGGTTTGGATGCAAGAGAGAGTGTTCTCATGAAGCCCAGAGTTTATGTAAATCATGCAAATGGGTTGGATGACATGAAAGATAGTCCCGAGAATACTGAATCCGTCGGTGTAGAAAGTTCAGATGGACCTCGTGCAAAGAAAAGAAGGAAGGGAAGGAGCGGTGGTGACGATTCTTCTTTCAAATTACTTGCTGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGA 538 0.3996 SLTEWTEKETFVLLDAWGDRFLQHGRKSLRSDEWQQVAEKVSEVSRVERTGTQCRNRLDTLKKKYKKDKIKFSEMGGGDRKWVYFKKMDKLMSSPPQQAGFSCGLDARESVLMKPRVYVNHANGLDDMKDSPENTESVGVESSDGPRAKKRRKGRSGGDDSSFKLLADSIQNFGKIYEK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme153122g00001 179 MobiDBLite consensus disorder prediction 122 163 - -
Trme153122g00001 179 Gene3D - 5 67 - -
Trme153122g00001 179 ProSiteProfiles Myb-like domain profile. 1 62 IPR001005 -
Trme153122g00001 179 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 3 179 IPR044823 -
Trme153122g00001 179 Pfam Myb/SANT-like DNA-binding domain 4 91 IPR044822 -
Trme153122g00001 179 MobiDBLite consensus disorder prediction 143 159 - -
Trme153122g00001 179 FunFam trihelix transcription factor ASIL2 5 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme153122g00001 Trme-Chr153122 1 538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme153122g00001 5 113 Trihelix Transcription Factor Family AT3G14180 39.655 2.89e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme153122g00001 Myb_DNA-bind_4 5.7e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme153122g00001 - - psat:127087507 304.293