Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15285g00001 AAGGAAAATCTGTGCTTATATGGATTGCTTAATGAGAAGTGGGAAGTGAATTTACCTGTTGAAGAAGTTCCTCCGGAGCTTCCTGAACCTGTGCTGGGCATCAACTTTGCTAGAGATGGGATGCAAGAGAAAGACTGGCTATCTTTAGTTGCTGTTCATAGTGATACATGGTTACTTTCCCTTGCATTCTACTTTGGAGCCAGATTTTCATTTGATAAAACTGACAGGAAACGTCTATTCAATTTGATTAATGAACTACCAACAGTATATGAAGTTGTTACTGGTGCAGCAAAGAAACAAGTTAAAGAGAAGTCTTCAGTCTCAAACAACAGTGGCAGCAAGTCTAAGTCCAGTTCTAAAGCGGTAAATATTTCTTGA 378 0.3889 KENLCLYGLLNEKWEVNLPVEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDTWLLSLAFYFGARFSFDKTDRKRLFNLINELPTVYEVVTGAAKKQVKEKSSVSNNSGSKSKSSSKAVNIS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15285g00001 125 MobiDBLite consensus disorder prediction 101 125 - -
Trme15285g00001 125 Pfam Alfin 1 95 IPR021998 GO:0006355|GO:0042393
Trme15285g00001 125 PANTHER CPG BINDING PROTEIN 1 120 IPR045104 GO:0006355|GO:0042393
Trme15285g00001 125 MobiDBLite consensus disorder prediction 98 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15285g00001 Trme-Chr15285 129 1261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15285g00001 1 124 Alfin-like Transcription Factor Family AT5G20510 73.387 5.35e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15285g00001 K26274 - oeu:111406251 163.31