Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme152719g00001 ATGAAGCCAGATATAAGTGCTCCAGGAGTGAATATCTTAGCTGCATATTCACCTTTAGGGAAATCCATAACTGATATGGATGACAAGAGAATGTTCAAATACAACATAGAAACTGGAACCTCTATGGCATGTCCTCACGTTGCTGGAGTTGTTGCATATGTGAATATGCTTATGGATCTGGGAATATCAATCCACAACAAGCCCTTCATCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTATGGTTATGATGAAGACAAAATTAAACAAATTAGTGGAGATAATTCCAGTTGCCATGGAGCTCCTGAAAGATCCTCGTTGA 345 0.3826 MKPDISAPGVNILAAYSPLGKSITDMDDKRMFKYNIETGTSMACPHVAGVVAYVNMLMDLGISIHNKPFILDLFMTSLSKIMCKCFVIMVMMKTKLNKLVEIIPVAMELLKDPR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme152719g00001 114 SUPERFAMILY Subtilisin-like 1 55 IPR036852 GO:0004252|GO:0006508
Trme152719g00001 114 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 55 IPR045051 -
Trme152719g00001 114 Pfam Subtilase family 1 55 IPR000209 GO:0006508|GO:0008236
Trme152719g00001 114 ProSitePatterns Serine proteases, subtilase family, serine active site. 39 49 IPR023828 -
Trme152719g00001 114 Gene3D Peptidase S8/S53 domain 1 55 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme152719g00001 Trme-Chr152719 17 457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme152719g00001 1 54 Subtilisin-like Serine Gene Family AT5G58820 66.667 2.37e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme152719g00001 - - mtr:112419033 85.5001