Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme152427g00001 ATGCAACTGAAATCGAAAGTCAATGCAGAGACTGGTACCATTAAAATATCTTCTCTACAAGCACTTTTAACTCACCTTTGGTGCTCCGTGATCCGTTCCAAACAAGTTGACCCTCAAGAAGAAGTCCATAATATGTTCATGATAGGAGTTAGACCGAGATTTGTTCCACCATTGCCAGAAGATTATTTTGGAAACGCAGTTACAAGTTGTGTGGTTAAAATGAAAGCCGGGGAGTTGTTGGAGGAAGGTGGACTTTGTAAAGGCGCTTGCGAGATGAACAAGTTAATTGCTTCACATTCTGATGAAAAGTTGAAGAATCAATATGAGTCTTGGTTAAGAAATCCAACCTTTGTTAGGCAAGCTAGCTCGACCGATAATAATTTCTTACTCATTAGCAGTTCTCCTTGGTTTGATGTTTATG 421 0.3943 MQLKSKVNAETGTIKISSLQALLTHLWCSVIRSKQVDPQEEVHNMFMIGVRPRFVPPLPEDYFGNAVTSCVVKMKAGELLEEGGLCKGACEMNKLIASHSDEKLKNQYESWLRNPTFVRQASSTDNNFLLISSSPWFDVY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme152427g00001 140 Pfam Transferase family 3 138 - -
Trme152427g00001 140 Gene3D - 1 140 IPR023213 -
Trme152427g00001 140 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme152427g00001 Trme-Chr152427 19 439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme152427g00001 1 109 Monolignol Biosynthesis Gene Families AT5G48930 25.688 1.73e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme152427g00001 - - vvo:131606449 172.17