Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1522g00001 GAACAAATTCCATATGGTGTTGCTGCAAGCCTCATTGACAGGTTGGCCTCTGCAGCCTTTCGTGAATTTGGACAGATTTATGGTGTTATGGATGAACTAGAAAGGCTTAAGAATACAGTTGAGTCTATTAGACCTGTGCTCCTTGATGCTGAGGACAAACAACAACAAAATCATTCCATTCAAAACTGGATAAGAAGACTCAAAGATGATGTGCTTCATCCTGCTGATGACTTGCTAGATGAATTTCTTATTGAAGATATGAAAAACAAAATGGATGAAACACCTAAGAACAAAGTGACTAAGGTTATAAGCTTGTTGAGGCAACCAGGAAATCAGAATGCCTTTGTAGTTGCTATTGTTGGGATTGGTGGTTTGGATAACTTTGATGCCAAAACTATTGTGAAGAAAATGTTGGACTTATTAACCAATGAGAAAATTGATGATACGTTGTCATTAGAAATCTTGCAAAATATGCTTCGTGACAATTTAGCTGGTAAACGATACTTGTTAGTCCTAGATGATATCTGGAATGAGAGCTATGAAAAATGGACTCAGTTGAGGACTTATTTGATGTGTGGTGCTCAAGGTAGCAAGATTGTAGTGACAACTCGTACTAAAGTCGTGGCACAAACCATGGATGTAAGTATCCCCTATGTTTTGAAGGGTTTGACTCCAGAAGAATCTTGGCGTTTGTTGAAGAAGATCATTACATATGGGGATGAGTCCAAAAGAGTGAACCAAACTCTTGAATCAATTGGCAAGAAGATAGCAGAAAAGTGCATTGGAGTTCCACTAGCAATCAGAACACTAGGAGGCCTATTACAAGGTAAAAGTGAAGAAAGAGAATGGATTGATGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGATGAAGAAAGCATCATGCCAGTGTTGAAACGGAGTTACCAAAACTTGTCGCCTCAATTAAGACAATGTTTTGCTTACTGCTCTTTATATCCTAAGGATTGGGAGATACAAAAGGATGAATTGATTCAAATGTGGATGGCACAAGGTTATCTCGAATGTTCAACTGTCGCTAACCAATTCGTGAATATTTTGTTGATGAAGTCATTTTTTCATGATGCTGAATCTGATGTAGATGGTGATATAAATAGTTTCAAAATGCATGATTTAATACATGATATTGCAATGCAAGTAGCCGGAAACGATTGTTGTTACTTGGATAGTGAGACAAAAAGAATCGTAGGAAATCCCATACATGTAATGTTGGAAAGTGATGCTATTGGTTTGAAGTATCTCCCACCAATGGAACGTCTTCCGTTCCTTAAGTCTATCCAGATAAGTTACCTTCATGAACTGGAGTACATATATTATGAAGAGCCTCTTTTGTGTAAAACATTCTTCCCATCTTTAGAAATTCTCATTTTATGGAAATGCAATAAGTTGAGGGGTTGGTGGAGGATGAATGATAATGTCAATGATGATGATGCTAATTCTTCACAGTCGCATAATCTCTCATTCCCTCCCTTTCCTCCGCGTCTTTCTGTTTTAACAATCATTGGATGTCCAATGTTGACTTGCATGCCTACTTTTCCAAACCTTGACAAGAGATTGGAATTCAGAGATTCTAATATGGGGACATTGGCAAAACATATTTTAATTATNGTCGCATAA 1656 0.3726 EQIPYGVAASLIDRLASAAFREFGQIYGVMDELERLKNTVESIRPVLLDAEDKQQQNHSIQNWIRRLKDDVLHPADDLLDEFLIEDMKNKMDETPKNKVTKVISLLRQPGNQNAFVVAIVGIGGLDNFDAKTIVKKMLDLLTNEKIDDTLSLEILQNMLRDNLAGKRYLLVLDDIWNESYEKWTQLRTYLMCGAQGSKIVVTTRTKVVAQTMDVSIPYVLKGLTPEESWRLLKKIITYGDESKRVNQTLESIGKKIAEKCIGVPLAIRTLGGLLQGKSEEREWIDVLQGDFWKLCEDEESIMPVLKRSYQNLSPQLRQCFAYCSLYPKDWEIQKDELIQMWMAQGYLECSTVANQFVNILLMKSFFHDAESDVDGDINSFKMHDLIHDIAMQVAGNDCCYLDSETKRIVGNPIHVMLESDAIGLKYLPPMERLPFLKSIQISYLHELEYIYYEEPLLCKTFFPSLEILILWKCNKLRGWWRMNDNVNDDDANSSQSHNLSFPPFPPRLSVLTIIGCPMLTCMPTFPNLDKRLEFRDSNMGTLAKHILIXVA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1522g00001 551 Gene3D - 309 393 IPR036388 -
Trme1522g00001 551 Gene3D Ribonuclease Inhibitor 414 537 IPR032675 -
Trme1522g00001 551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 323 IPR027417 -
Trme1522g00001 551 Pfam NB-ARC domain 127 311 IPR002182 GO:0043531
Trme1522g00001 551 Pfam Rx N-terminal domain 9 93 IPR041118 -
Trme1522g00001 551 Gene3D - 126 217 IPR027417 -
Trme1522g00001 551 FunFam Probable disease resistance protein At1g63360 309 392 - -
Trme1522g00001 551 Gene3D - 8 112 - -
Trme1522g00001 551 PANTHER DISEASE RESISTANCE PROTEIN RP 33 411 IPR044974 GO:0006952
Trme1522g00001 551 Gene3D - 222 308 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1522g00001 Trme-Chr1522 3 2589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1522g00001 157 393 WRKY Transcription Factor Family AT5G45050 26.033 2.87e-09 58.2