Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15191g00001 ATGCACTGGAAAGGCATTGTGAGCAAGTTAGATCATGTCTTAGCTATATTATCTGACAACTATGTCCCTCCTATGATAACAAGGAAGATATTTAGTCAGGTTTTCTCTTACATGAATGTTCAACTCTTTAATAGTTTGTTGCTTCGTCGTGAGTGCTGCTCCTTTAGCAATGGAGAATATTTGAAAGCAGGTTTGCATGAGTTGGAACTATGGTGTATCAAAGCAACAGATCAGATTGCAGGGTCATCTTGGGATGAACTAAAACATATACGCCAAAGTGTTGGATTTCTGGTATACTTTCTCCGATAG 309 0.3851 MHWKGIVSKLDHVLAILSDNYVPPMITRKIFSQVFSYMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCIKATDQIAGSSWDELKHIRQSVGFLVYFLR 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15191g00001 102 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 2 98 - -
Trme15191g00001 102 SMART DIL_2 29 100 IPR002710 -
Trme15191g00001 102 ProSiteProfiles Dilute domain profile. 1 102 IPR002710 -
Trme15191g00001 102 Pfam DIL domain 29 98 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15191g00001 Trme-Chr15191 695 1310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15191g00001 2 98 Myosins gene family AT1G54560 71.134 8.21e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15191g00001 K10357 - gmx:100786418 186.808