Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151850g00001 ATGGGCATCGCTTATCGTGACCTTAAACCTGAAAACGTTCTTATTCAACAATCTGGCCACGTCACCTTAACTGATTTNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCCACTGACGGAACCTAACGGAAAGATAGCACGAGTTATTCCGGTGAGTCGACGCGGGGTGAGTTTCTCCGACGGTGAACGGTCTAACTCGTTTGTTGGTACGGCGGAGTACGTCGCGCCGGAGGTTATACGCGGCGACGGACATGAATTCGCGGTTGATTGGTGGGCGTTTGGAGTATTGACTTACGAGATGTTGTATGGGAAAACGCCGTTTAAGGGGAAGAATAAGAAGGAAACGTTT 414 0.3792 MGIAYRDLKPENVLIQQSGHVTLTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEPNGKIARVIPVSRRGVSFSDGERSNSFVGTAEYVAPEVIRGDGHEFAVDWWAFGVLTYEMLYGKTPFKGKNKKETF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151850g00001 138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Trme151850g00001 138 Pfam Protein kinase domain 82 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme151850g00001 138 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Trme151850g00001 138 Gene3D Transferase(Phosphotransferase) domain 1 1 25 - -
Trme151850g00001 138 Gene3D Transferase(Phosphotransferase) domain 1 83 138 - -
Trme151850g00001 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme151850g00001 138 PANTHER FLIPPASE KINASE 1-RELATED 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151850g00001 Trme-Chr151850 1 414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151850g00001 1 138 AGC Kinase Gene Family AT3G20830 56.757 1.70e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme151850g00001 Pkinase 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151850g00001 - - qsa:O6P43_000123 159.844