Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151849g00001 CCAATAACAGGAGCGTCAATGAACCCAGTTAGAACTCTAGGTCCAGCTATTGTTACAAACAACTACAAAGACATATCGGTCTATCTAGTAGCTCCCATACTTGGAGCTCTAGTTGGGGCAGGTGCCTATACTGCAGTCAAGCTACCCGAAGAAGATGATGTTAATGCAAAGACTAATATTTTTTCAAACCACCCCAGCTTCAGAAGTTCATCATAA 216 0.4213 PITGASMNPVRTLGPAIVTNNYKDISVYLVAPILGALVGAGAYTAVKLPEEDDVNAKTNIFSNHPSFRSSS 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151849g00001 71 PANTHER AQUAPORIN NIP2-1 1 52 IPR034294 -
Trme151849g00001 71 Pfam Major intrinsic protein 1 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme151849g00001 71 Gene3D Glycerol uptake facilitator protein. 1 63 IPR023271 -
Trme151849g00001 71 SUPERFAMILY Aquaporin-like 1 55 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151849g00001 Trme-Chr151849 101 316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151849g00001 1 61 Major Intrinsic Protein MIP AT1G80760 68.852 5.62e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151849g00001 K09874 - gmx:100815637 95.1301