Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151816g00001 ATGCATTATCTTAATGGAGCGATTCATGAGAGCATGAGGCTTTTTCCACCGGTTCAGTTCGATTCAAAGTTTGCATTAGAAGATGACGTGTTGCCTGATGGAACTTTTATAAAAAAGGGAAGTAGGGTAACTTATCACCCGTATGCGATGGGTCGGATGGAGAAAATTTGGGGACCAGATTGTTTAGAATTTAAACCGGAAAGATGGTTGAGAGAAGGTGTATTTGTACCAAAATGTCCTTTTAAGTATCCGGTTTTTCAAGGCGGTTCGAGRGTTTGTTTGGGAAAAGAGTTGGCTATTGTGGAGATGAAGGCTGTTGTTGCTGCATTAGTAAAACGGTTTGATGTTCGGATTGTTGGACCGAATCAGGAGCCACAGTTTGATTCCGGTCTAACTGCCACATTTAGAGGTGGCTTACCAGTTGAGGTTTATGAAAGAACATGA 444 0.4167 MHYLNGAIHESMRLFPPVQFDSKFALEDDVLPDGTFIKKGSRVTYHPYAMGRMEKIWGPDCLEFKPERWLREGVFVPKCPFKYPVFQGGSRVCLGKELAIVEMKAVVAALVKRFDVRIVGPNQEPQFDSGLTATFRGGLPVEVYERT 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151816g00001 147 Gene3D Cytochrome P450 1 132 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 PRINTS E-class P450 group IV signature 52 70 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 PRINTS E-class P450 group IV signature 93 111 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 PRINTS E-class P450 group IV signature 35 49 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 PRINTS E-class P450 group IV signature 1 17 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 PANTHER CYTOCHROME P450 1 140 - -
Trme151816g00001 147 Pfam Cytochrome P450 1 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 SUPERFAMILY Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151816g00001 147 Coils Coil 141 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151816g00001 Trme-Chr151816 49 492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151816g00001 1 147 Cytochrome P450 AT2G27690 62.667 2.77e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151816g00001 K20624 - gmx:100813091 258.455