Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151795g00001 CCTGATTCCGACCCTAACCAACTCCAAACCACACCTAATTGGCTTAACAACGCTCTTCTTCGTACCCACTACACCGACAACAATAACAACCACAACAACAATAACGACGTTACTAACGGCGTTAACAACGACACAAACGTTAACGGTGCTTCCAATTTTCTTAATCTACAAACGGCTTCCGACTCCGCCGCAGTTCAAAACTCCGGTCAATGGCTTTCCCGGTCGATTCTCCACCGGCACCACGGTGAAGTCATCGACGATGTCTCCGTCTCCGCCGCCGACGAATTAGGCGATTTGAAAGGAGAAGGTATCGGCGGGAAGGGAGAGACGGTGGTCGGAGACGGCGGAGGAGGGTTAGTGAACTGGCAGATGGGGAGGTGGAAGGCGGAGATTATGGCGCATCCGTTGTATGAACAGTTGTTGTCGGCACACGTGGCGTGTTTGAGAATTGCAACGCCGGTGGATCAGTTACCGAGGATTGATGCTCAGTTGGCACAGTCACAGAATGTGGTCGCCAAGTATTCGGCGTTTGGACAGAAC 540 0.5222 PDSDPNQLQTTPNWLNNALLRTHYTDNNNNHNNNNDVTNGVNNDTNVNGASNFLNLQTASDSAAVQNSGQWLSRSILHRHHGEVIDDVSVSAADELGDLKGEGIGGKGETVVGDGGGGLVNWQMGRWKAEIMAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSAFGQN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151795g00001 180 Pfam KNOX1 domain 128 168 IPR005540 GO:0003677|GO:0005634
Trme151795g00001 180 SMART KNOX1_2 125 169 IPR005540 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151795g00001 12 178 Homeobox Transcription Factor Family AT5G25220 52.486 1.07e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151795g00001 - - pvu:PHAVU_009G090500g 197.208