Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151729g00001 ATGGACATTTTATCTTTCAGAGAAAATTTTCACATTCTTAAGCACAGCAAACTGGATTCTAACCAAGAGGGCAGTGGAGTTTTGGCGAGAAAACTTAGGGTTAATGAACAATTTATGCACTTGCACTGGAGAGGGGATGCACCCACCATATTGGAAATGTGTTCACAATACTATGATAGTGAAGGAGTATGTCATTCCATAGAAAATCAGAAAATCAAATTTAGGCAGGTGATTCAAGAGATGGAGGATAGTGGCCTTAAGCCAATTGCATTTGCTTGTAGAGAAACACAAGTGCAAGAACTGGAGCAAGATGAATTGACCTTGTTAGCACTGGTAGGTCTCAAATTCAAGTGTCAAGAATCAACAAAATTAGCTTTGCAAAATCTCAAGAATAATGGAATAGAAATCAAATTGGTCTCGGAGGATGACATCATGGTAGTGAAAGACATGGCTTGTGAACTGAGAATAGAAGTGCCGATAAACGGTCACCTTGAAGGAAAAGA 503 0.3877 MDILSFRENFHILKHSKLDSNQEGSGVLARKLRVNEQFMHLHWRGDAPTILEMCSQYYDSEGVCHSIENQKIKFRQVIQEMEDSGLKPIAFACRETQVQELEQDELTLLALVGLKFKCQESTKLALQNLKNNGIEIKLVSEDDIMVVKDMACELRIEVPINGHLEGK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151729g00001 167 PANTHER CATION TRANSPORTING ATPASE 3 156 - -
Trme151729g00001 167 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 27 114 IPR023299 GO:0000166
Trme151729g00001 167 Gene3D - 1 115 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151729g00001 Trme-Chr151729 1 503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151729g00001 1 156 Primary Pumps ATPases AT3G63380 34.810 2.48e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151729g00001 K01537 - qsa:O6P43_020733 172.17