Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15171g00001 ATGAGGACAGATGGTCCTAAGGGTTTGTATAGAGGTTTTGGGATATCAGTTGTGACGTATGCGCCTTCAAATGCAGTTTGGTGGGCTTCATATTCTGTTGCACAGAGGATGGTTTGGGGTGGAGTTGGATATTACTTGAGTAACAAGAAAGGTGGGGAGGGAAGCGATAGATCTATCAATGGGGCTAATGTGTTGAGGCCGGATACGAAAACGGTTATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGAGGCATGTCTGCTTTGATTACTATGCCATTGGATACAATCAAGACAAGGCTGCAGGTCTTGGATGGCGATGAGAATGGCCGTCGTGGACCAACGGTGATGCAGACAGTTAGAAGTTTGGTTAAGGAAGGTGGTTGGACGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCTGTGTCTGCAACAACAATGATCACAACCTATGAGTTCCTTAAACGGCTTTCCGCAAAGAATCAAGAGGTTTTGACATGA 510 0.4667 MRTDGPKGLYRGFGISVVTYAPSNAVWWASYSVAQRMVWGGVGYYLSNKKGGEGSDRSINGANVLRPDTKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWTACYRGLGPRWASMSVSATTMITTYEFLKRLSAKNQEVLT 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15171g00001 169 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 160 IPR018108 -
Trme15171g00001 169 Pfam Mitochondrial carrier protein 1 38 IPR018108 -
Trme15171g00001 169 Pfam Mitochondrial carrier protein 75 164 IPR018108 -
Trme15171g00001 169 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 166 - -
Trme15171g00001 169 SUPERFAMILY Mitochondrial carrier 2 157 IPR023395 -
Trme15171g00001 169 Gene3D Mitochondrial carrier domain 1 169 IPR023395 -
Trme15171g00001 169 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 37 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15171g00001 Trme-Chr15171 898 1407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15171g00001 1 166 Chloroplast and Mitochondria Gene Families AT1G72820 73.964 1.21e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15171g00001 K15121 - gmx:100784616 268.085