Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151688g00001 GATAATCACATTGGACAAGAGTGTTTAATTGAGGAAGCTGAAGCTATCAAATTAGGATATCTTCAAAATATCATCTCTGAGACTATGCGGTTACACCCACCAGCAACAATGTTGGTGCCACATTTATCATCCGAAGATTGTATTGTGGGAGGATTTGATGTGCCACATAACACCATGTTGATGGTGAATGCGTGGGCTATTCATAAGGACCCTGATTTGTGGGCCGACCCGACGAGCTTTAAACCTGAGAGGTTTGAGAATGGTCAACAAGCAGATGTACGTGGCTTCCTTCCTTTTGGGATGGGGAGGAGGGCATGTCCTGGGTCGGGGTTAGGCCTAAGAACTATGAGCTTGACTCTAGGCTCGTTGATTCAATGCTTTGATTGGAAAAAGATTGGCAAGGAAGAAATTAACATGGTCGAAAGACATGGTGTAACGACCCATTTTTAG 450 0.4422 DNHIGQECLIEEAEAIKLGYLQNIISETMRLHPPATMLVPHLSSEDCIVGGFDVPHNTMLMVNAWAIHKDPDLWADPTSFKPERFENGQQADVRGFLPFGMGRRACPGSGLGLRTMSLTLGSLIQCFDWKKIGKEEINMVERHGVTTHF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151688g00001 149 PRINTS E-class P450 group I signature 22 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PRINTS E-class P450 group I signature 63 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PRINTS E-class P450 group I signature 96 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PRINTS E-class P450 group I signature 106 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PRINTS P450 superfamily signature 23 34 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PRINTS P450 superfamily signature 97 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PRINTS P450 superfamily signature 106 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 SUPERFAMILY Cytochrome P450 2 148 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 99 108 IPR017972 GO:0005506|GO:0016705
Trme151688g00001 149 Gene3D Cytochrome P450 1 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 Pfam Cytochrome P450 2 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme151688g00001 149 PANTHER CYTOCHROME P450 82C3-RELATED 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151688g00001 Trme-Chr151688 2 451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151688g00001 1 146 Cytochrome P450 AT4G37360 59.589 4.57e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151688g00001 K13260 - gmx:100804509 217.624