Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151617g00001 GGTAAAACTCTGGCATTTGTGTTGCCCATATTAGAGTCATTGACAAATGGTCCAGCTAAATCAGTTAGAAAGACCGGTTATGGAAGGGTCCCAAGTGTCCTCGTGCTTTTACCTACTAGGGAATTGGCCAATCAGGTGTATGCCGACTTTGAACTTTATGGTTCGTCCCTGGGATTGGCTGCTTGCGCTGTATATGGAGGAGCTCCATATGGACCTCAGGAGGGTAAGCTCAGGAGAGGTGTTGATATCGTTATTGGAACACCAGGTCGTATTAAG 276 0.4674 GKTLAFVLPILESLTNGPAKSVRKTGYGRVPSVLVLLPTRELANQVYADFELYGSSLGLAACAVYGGAPYGPQEGKLRRGVDIVIGTPGRIK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151617g00001 92 Gene3D - 1 92 IPR027417 -
Trme151617g00001 92 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 91 - -
Trme151617g00001 92 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 92 IPR014001 -
Trme151617g00001 92 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 91 IPR027417 -
Trme151617g00001 92 Pfam DEAD/DEAH box helicase 1 91 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151617g00001 Trme-Chr151617 168 529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151617g00001 34 91 Eukaryotic Initiation Factors Gene Family AT1G72730 44.828 1.91e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151617g00001 K16911 - psom:113304641 160.614