Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme151112g00001 ATGCATCACTTAGCTGGTCACCCAAATGTGATACAAATAATTGGTGCTTATGAAGATGCTGTTGCTGTTCATGTTGTTATGGAGTTATGTGCTGGTGGGGAACTTTTTGATAGGATTATACAGAGAGGGCATTATACTGAGAGAAAAGCTGCTGAACTTGCTAGGTTGATTTTAGGTGTTGTTCAAGCTTGTCATTCTTTAGGTGTTATGCATAGAGATTTGAAGCCTGAGAATTTTCTTTTT 243 0.3786 MHHLAGHPNVIQIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILGVVQACHSLGVMHRDLKPENFLF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme151112g00001 81 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
Trme151112g00001 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme151112g00001 81 Gene3D Phosphorylase Kinase; domain 1 12 29 - -
Trme151112g00001 81 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 81 - -
Trme151112g00001 81 Pfam Protein kinase domain 2 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme151112g00001 81 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Trme151112g00001 81 SUPERFAMILY Protein kinase-like (PK-like) 2 81 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme151112g00001 Trme-Chr151112 73 315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme151112g00001 1 81 EF-hand Containing Proteins AT2G38910 90.123 1.76e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme151112g00001 Pkinase 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme151112g00001 K13412 - mnt:21389869 165.622