Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150668g00001 ATGAAGTTCAATATTCTATCAGGAACTTCTATGTCTTGTCCTCATGTTACTGGAATTGCAGCCTTTATCAAAGCCGTGCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACTACTGCAACAATTCTGGATAAGCACAATGAACCGATTAGAGTGGATCCTGATAGAGGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGCACTGGAGCCTGGT 243 0.4321 MKFNILSGTSMSCPHVTGIAAFIKAVHPSWSPSAIKSAIMTTATILDKHNEPIRVDPDRGRANAFDYGSGFVNPARALEPG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150668g00001 81 ProSitePatterns Serine proteases, subtilase family, serine active site. 8 18 IPR023828 -
Trme150668g00001 81 SUPERFAMILY Subtilisin-like 3 80 IPR036852 GO:0004252|GO:0006508
Trme150668g00001 81 Pfam Subtilase family 3 46 IPR000209 GO:0006508|GO:0008236
Trme150668g00001 81 ProSiteProfiles Serine proteases, subtilase domain profile. 1 78 - -
Trme150668g00001 81 Gene3D Peptidase S8/S53 domain 2 81 IPR036852 GO:0004252|GO:0006508
Trme150668g00001 81 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 81 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150668g00001 Trme-Chr150668 1 488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150668g00001 2 81 Subtilisin-like Serine Gene Family AT2G05920 57.500 2.97e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150668g00001 - - gmx:100784026 151.754