Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150587g00001 GAGGCAAATTATGTTACAAAGAAGCAAGATCTCTTCTCTGCCTACAAACTTACACAGGAAGACAAAGAAGAGATTGAAAATTTGGGCAAAGACCCCCGAATTGGAGAAAGGATTGTCAAGTCTATTGCTCCATCAATCTATGGTCACGATGATATAAAAACCGCAATAGCTTTAGCTATGTTTGGAGGGCAAGAAAAGAATGTTGAAGGGAAACATCGGCTGCGAGGAGACATAAATGTTCTTCTTCTCGGCGATCCAGGAACAGCAAAGTCTCAATTTCTAAAGTATGTGGAAAAAACTGGACAGAGAGCTGTATACACCACTGGCAAAGGAGCTTCTGCTGTGGGTCTCACAGCTGCAGTTCACAAGGATCC 374 0.4278 EANYVTKKQDLFSAYKLTQEDKEEIENLGKDPRIGERIVKSIAPSIYGHDDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDP 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150587g00001 125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 108 IPR027417 -
Trme150587g00001 125 SMART mcm 1 125 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme150587g00001 125 ProSiteProfiles MCM family domain profile. 34 125 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme150587g00001 125 Gene3D - 14 125 IPR027417 -
Trme150587g00001 125 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 125 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme150587g00001 125 Pfam MCM P-loop domain 22 125 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150587g00001 Trme-Chr150587 1 544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150587g00001 1 125 Core DNA Replication Machinery Family AT1G44900 92.000 6.67e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150587g00001 K02540 - qsu:111999780 246.128