Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150566g00001 ATGGTGGGAGGAGGAAGTGATGGCTCATTGGATCTATGTGCAAGAGTTTGCTTAATAGATGAGAATGAAAACATCATCTTCCATTCTTATGTCACTCCACCAATTCCAGTCACAAACTACAGGTATGAGACAACAGGTATTAGACATGAATATTTAAGGGATGCAATGCCATTGAAANTAGTTCAAAGGAAGATTCAAGAGTTCCTTTGTAATGGAGAACCTATGTGGACAATTCGTTCAAGAGGAGGAAAAGCTAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTTGCTTCTTTGCAAATTGAGTATCCAACACCAAAAATAAG 329 0.386 MVGGGSDGSLDLCARVCLIDENENIIFHSYVTPPIPVTNYRYETTGIRHEYLRDAMPLKXVQRKIQEFLCNGEPMWTIRSRGGKARILVGHGLDHDLASLQIEYPTPKI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150566g00001 109 SUPERFAMILY Ribonuclease H-like 7 106 IPR012337 -
Trme150566g00001 109 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 106 IPR047021 GO:0004527
Trme150566g00001 109 Gene3D - 1 109 IPR036397 GO:0003676
Trme150566g00001 109 Pfam Exonuclease 11 105 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150566g00001 Trme-Chr150566 116 444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150566g00001 1 109 C2H2 Transcription Factor Family AT3G27970 79.817 2.01e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150566g00001 - - aprc:113862359 202.601