Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1504g00001 CCGGAGTGGGTTTTGAAAGCTGGAGTTGTCAAACACGGGTCAGGAAAATGGCACACCATACTTACTGATCCCGAGTTCAGTTCCATTTTGGATAAATGGAGGAATATAAATGTCATGGCAGTATGGGGATCCCGGCAGAAGGCAAAGCTTTCCCTTAAAAAGGAGCTTGCACTTCCAGCCCCCAAAATTAACAATGACCAATTGGCCTTGAGTAAAGTTCAACATGAAGACATTCTCGATGTTAAGCCCCTAGCAGTTTCTAGTGGAACATTGCAATCTCCTAATTCAAAAGAACAAGTATCAAGATATTACACCCCTTACAAGTAA 327 0.4251 PEWVLKAGVVKHGSGKWHTILTDPEFSSILDKWRNINVMAVWGSRQKAKLSLKKELALPAPKINNDQLALSKVQHEDILDVKPLAVSSGTLQSPNSKEQVSRYYTPYK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1504g00001 108 MobiDBLite consensus disorder prediction 88 108 - -
Trme1504g00001 108 PANTHER SINGLE MYB HISTONE 4 4 90 IPR044597 GO:0003691
Trme1504g00001 108 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1504g00001 Trme-Chr1504 275 987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1504g00001 2 73 Single Myb Histone (SMH) Gene Family AT5G67580 54.321 5.09e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1504g00001 K09422 - gmx:778043 129.028