Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150481g00001 ATGGATCATTACAAGGTTTTAGGTTTACACAAAACAGCTTCGAAAGAAGAAATCAAAGCAGCATTCAAAAAACTAGCGTTTCAATTTCATCCAGATAAGCATTCTCAATCACCGAAATCCGTTAAAGAGAACGCCACACTTCAATTCAAGCAGGTTTCTGAAGCATACGAAGTTCTCATGGATGATCGTAAACGCGCCGATTATAATTACCGGTGGCGRTCCGGCGCCGGAAGACAAAGTGCMGGTGGTAACAGTGGTAACTATTATTACTCTCAGTATAGTTATGGACATGGTAGAAGTGGGAGTGGATATGAGTATAAAAGTAGGTCTAATGGTGGTGGAGGTGGTGGTTTTGCGTCGAAGTTTGAAGTTGTTATTCGGATTTTGACGGCGAAATCTTCTCTTCTTAATCTTGGATTTGCAGCGTAA 429 0.4103 MDHYKVLGLHKTASKEEIKAAFKKLAFQFHPDKHSQSPKSVKENATLQFKQVSEAYEVLMDDRKRADYNYRWRSGAGRQSAGGNSGNYYYSQYSYGHGRSGSGYEYKSRSNGGGGGGFASKFEVVIRILTAKSSLLNLGFAA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150481g00001 142 CDD DnaJ 2 61 IPR001623 -
Trme150481g00001 142 PANTHER CO-CHAPERONE PROTEIN DJLA 4 103 - -
Trme150481g00001 142 Pfam DnaJ domain 2 69 IPR001623 -
Trme150481g00001 142 FunFam DnaJ domain protein 1 90 - -
Trme150481g00001 142 PRINTS DnaJ domain signature 64 83 IPR001623 -
Trme150481g00001 142 PRINTS DnaJ domain signature 4 22 IPR001623 -
Trme150481g00001 142 PRINTS DnaJ domain signature 44 64 IPR001623 -
Trme150481g00001 142 PRINTS DnaJ domain signature 22 37 IPR001623 -
Trme150481g00001 142 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Trme150481g00001 142 SUPERFAMILY Chaperone J-domain 1 94 IPR036869 -
Trme150481g00001 142 Gene3D DnaJ domain 1 126 IPR036869 -
Trme150481g00001 142 SMART dnaj_3 1 64 IPR001623 -
Trme150481g00001 142 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150481g00001 3 69 C2H2 Transcription Factor Family AT1G74250 43.284 1.77e-12 61.6