Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150422g00001 ATGTTATTTCGTGCTACAAGAGGCAATATGTTTTTCAATCAGGCACCAGCTGGAGAGCAAATCATGGATCCTGTTTCAACTGAGATGATCGAGAAAACAGTATTCGTTGTGTTTTTCTCCGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATAA 199 0.392 MLFRATRGNMFFNQAPAGEQIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDI 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150422g00001 66 PANTHER VACUOLAR PROTON ATPASES 1 65 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trme150422g00001 66 Pfam V-type ATPase 116kDa subunit family 1 65 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150422g00001 Trme-Chr150422 71 432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150422g00001 1 65 Primary Pumps ATPases(2) AT2G28520 83.077 8.42e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150422g00001 K02154 - lja:Lj0g3v0112099.1 133.65