Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150379g00001 TCTCAGACATTGCTTCCTCCCCTCCCATCTAGGAAGTCTTCAGTTAGGAAATCTTTAAAGATTTCACATGAAGTTCATATTCCTGGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGTATGAATGCCCTTTGTGGTGTTGGAATCCTTTCAACCCCTTATGCTCTACATGAAGGTGGATGGGCTGCACTTGGAATCTTGCTGATATTTGCAGCATTTTCCTTTTATACTGGATTGCTGTTGCGTTATTGCTTGGATAGCGAACCTGGTCTGGAAACCTATCCCGACATTGGTCAAGCAGCTTTTGGTACTAGTGGTCGTGTTGTCATTTCA 333 0.4354 SQTLLPPLPSRKSSVRKSLKISHEVHIPGQCSFGQAVLNGMNALCGVGILSTPYALHEGGWAALGILLIFAAFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTSGRVVIS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150379g00001 111 PANTHER AMINO ACID TRANSPORTER 29 109 - -
Trme150379g00001 111 Pfam Transmembrane amino acid transporter protein 31 110 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150379g00001 Trme-Chr150379 1 471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150379g00001 1 111 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.912 1.11e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150379g00001 K15015 - gmx:100798108 172.17