Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150338g00001 GAAACTGAGGAGTTGATTGCAGATGTTCTTGGAGTTGAAGTTTTCAGGCAGGCAGTTGCTGGAAATGTTCTTTCAGGAAGTTACTGTGCTCTGTCCAACAGAGGTGGTTTGGTAAGAGCAAGACATGTCCTTTTGAATGCTTCAAAAAATTGA 153 0.4183 ETEELIADVLGVEVFRQAVAGNVLSGSYCALSNRGGLVRARHVLLNASKN 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150338g00001 50 Pfam eIF-6 family 1 41 IPR002769 GO:0042256|GO:0043022
Trme150338g00001 50 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 41 IPR002769 GO:0042256|GO:0043022
Trme150338g00001 50 Gene3D - 1 45 - -
Trme150338g00001 50 SUPERFAMILY Pentein 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150338g00001 Trme-Chr150338 285 437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150338g00001 1 41 Eukaryotic Initiation Factors Gene Family AT3G55620 75.610 1.26e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150338g00001 K03264 - pop:18101353 71.6329