Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150315g00001 ATGGCGAGAAAATACGAAGGACATGCTGTTGGAATAGACCTAGGAACAACCTACTCATGTGTCGCTGTTTGGTTGGAGGAAAAAAGCAGAGTTGAGATAATCCACAACGATGAAGGCAACAAAATCACACCTTCTTTTGTTGCTTTCACTGATCATCAAAGGTTGGTCGGTGGTGCTGCTAAGGATCAAGCTGCCATTAACCCACAAAACACTGTCTTTG 220 0.4364 MARKYEGHAVGIDLGTTYSCVAVWLEEKSRVEIIHNDEGNKITPSFVAFTDHQRLVGGAAKDQAAINPQNTVF 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150315g00001 73 Gene3D - 1 73 - -
Trme150315g00001 73 FunFam heat shock 70 kDa protein-like 3 73 - -
Trme150315g00001 73 PRINTS 70kDa heat shock protein signature 38 50 - -
Trme150315g00001 73 PRINTS 70kDa heat shock protein signature 8 21 - -
Trme150315g00001 73 PRINTS 70kDa heat shock protein signature 60 68 - -
Trme150315g00001 73 SUPERFAMILY Actin-like ATPase domain 8 73 IPR043129 -
Trme150315g00001 73 Pfam Hsp70 protein 9 73 IPR013126 GO:0005524|GO:0140662
Trme150315g00001 73 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Trme150315g00001 73 PANTHER HEAT SHOCK PROTEIN 70KDA 9 73 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150315g00001 Trme-Chr150315 201 420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150315g00001 1 73 Calmodulin-binding Proteins AT3G12580 68.493 2.68e-29 106