Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150046g00001 GAATCACTTCAAGAAGCGATTATCCTTCCCCTTAGAAGACCAGATCTATTCAAAGGTGATGGGGTTCTGAAGCCATGTAAAGGTGTATTGCTTTTTGGACCTCCCGGTACTGGAAAAACCATGTTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAACGTCTCTTCGTCCACCATCACTACAAAGTCGTTTGGAGAGAGTGAACAGAAAGTCCGAGCTTTGTTTTCACTAGCGGCAAAGGTTTCCCCAACTATTATTTTTATTGATGAAGTTGATAGCATACTTGAGAAGCGGTCTACAGAATCTGAGCACGACGTAATGAGAAGAATTAAAAATGAATTCATGTCCCATTGGGATGGACTATTGTCAAAACCTGATGACAAAATTATTGTTCTTGCTGCCACCAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAATGCAGGTAA 468 0.4103 ESLQEAIILPLRRPDLFKGDGVLKPCKGVLLFGPPGTGKTMFAKAIANEAGASFINVSSSTITTKSFGESEQKVRALFSLAAKVSPTIIFIDEVDSILEKRSTESEHDVMRRIKNEFMSHWDGLLSKPDDKIIVLAATNRPFDLDEAIIRRFQCR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150046g00001 155 SMART AAA_5 25 155 IPR003593 GO:0016887
Trme150046g00001 155 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1 155 - -
Trme150046g00001 155 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 153 - -
Trme150046g00001 155 ProSitePatterns AAA-protein family signature. 132 151 IPR003960 GO:0005524|GO:0016887
Trme150046g00001 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 152 IPR027417 -
Trme150046g00001 155 Pfam ATPase family associated with various cellular activities (AAA) 29 153 IPR003959 GO:0005524|GO:0016887
Trme150046g00001 155 Gene3D - 1 155 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150046g00001 Trme-Chr150046 1 468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150046g00001 3 150 Calmodulin-binding Proteins AT3G56690 40.268 2.19e-28 107