Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme150009g00001 GTATTCATTATTGGAGCCACTAACAGACCTGACATCATTGATTCAGCACTTCTCCGGCCAGGTCGTTTAGATCAGTTGATCTATATTCCTCTTCCTGATGAGGATTCCCGTCATTCGATCTTCAAGTCCTGCTTGAGGAAGTCACCTGTCGCTAAAGATGTTGATTTGAGAGCATTGTCTAGGTATACTCAAGGTTTTAGTGGTGCTGACATAACAGAGATATGCCAGCGAGCATGCAAATATGCTATAAGAGAAAACATAGAGAAGGACAAAGAGCAAGAGAGGAAGAGGAAGGAAAACCCCGAGGCAATGGATGAAGACTTTGTCGACGATGAAGTTGCAGAGATTAAGGCGACTCATTTTGAAGAGTCAATGAAGTATGCACGTAGGAGTGTTAGTGACGCTGATATAC 412 0.432 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRHSIFKSCLRKSPVAKDVDLRALSRYTQGFSGADITEICQRACKYAIRENIEKDKEQERKRKENPEAMDEDFVDDEVAEIKATHFEESMKYARRSVSDADI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme150009g00001 137 ProSitePatterns AAA-protein family signature. 1 19 IPR003960 GO:0005524|GO:0016887
Trme150009g00001 137 MobiDBLite consensus disorder prediction 89 104 - -
Trme150009g00001 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 135 IPR027417 -
Trme150009g00001 137 PANTHER AAA-FAMILY ATPASE 1 136 - -
Trme150009g00001 137 MobiDBLite consensus disorder prediction 89 109 - -
Trme150009g00001 137 Pfam ATPase family associated with various cellular activities (AAA) 1 31 IPR003959 GO:0005524|GO:0016887
Trme150009g00001 137 Pfam AAA+ lid domain 53 93 IPR041569 -
Trme150009g00001 137 Gene3D - 35 137 - -
Trme150009g00001 137 Gene3D - 1 32 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme150009g00001 Trme-Chr150009 12 546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme150009g00001 1 98 Calmodulin-binding Proteins AT3G56690 47.959 2.10e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme150009g00001 K13525 - gmx:547850 243.432