Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme149872g00001 | GAGCTCTTGATTGATTTCTATACAAGTTCTGGGAACCGAAAACCCGACAACATTATCATTTTCAGGGATGGTGTCAGTGAGTCCCAGTTTAACCAAGTGTTGAACATTGAACTGAGCCAAGTCATTGAGGTTCTTAAATTGTTCAAATTTTCTTTTAATATATGA | 165 | 0.3636 | ELLIDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQVIEVLKLFKFSFNI | 54 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme149872g00001 | 54 | ProSiteProfiles | Piwi domain profile. | 1 | 54 | IPR003165 | GO:0003676 | |
Trme149872g00001 | 54 | SUPERFAMILY | Ribonuclease H-like | 3 | 50 | IPR012337 | - | |
Trme149872g00001 | 54 | Gene3D | - | 1 | 54 | IPR036397 | GO:0003676 | |
Trme149872g00001 | 54 | Pfam | Piwi domain | 1 | 49 | IPR003165 | GO:0003676 | |
Trme149872g00001 | 54 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 2 | 44 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme149872g00001 | Trme-Chr149872 | 182 | 527 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme149872g00001 | 1 | 41 | Eukaryotic Initiation Factors Gene Family | AT1G48410 | 58.537 | 1.16e-07 | 43.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme149872g00001 | K11593 | - | gmx:100792105 | 86.6557 |