Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149803g00001 GCTGCTTTCAGGTCCTTTCAACAACGGAAACATTATCGTAAAATCCTTTGGTCAGTTAGTGTGGTTGAGAAAGCAGTGTTGCGTTGGCGCTTAAAGAGAAAGGGCTTCCGCGGGCTCCAGCTTAATACTGAGGAAGCAGATGGAGATCAGAATCAGCAAAGTGATGCAGAGGAAGATTTTTTTCGTACTAGTAGGAAACAAGCTGAAGAACGTGTTGAGAGAAGTGTAATAAGAGTGCAGGCTATGTTCCGTTCTAAGAAAGCACAAGAAGATTACAGGAGGATGAAGTTGGCCCTTAATCAAGCAAAG 309 0.4369 AAFRSFQQRKHYRKILWSVSVVEKAVLRWRLKRKGFRGLQLNTEEADGDQNQQSDAEEDFFRTSRKQAEERVERSVIRVQAMFRSKKAQEDYRRMKLALNQAK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149803g00001 103 Coils Coil 85 103 - -
Trme149803g00001 103 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Trme149803g00001 103 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 98 - -
Trme149803g00001 103 Pfam IQ calmodulin-binding motif 73 93 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme149803g00001 Trme-Chr149803 167 475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149803g00001 1 103 CAMTA Transcription Factor Family AT3G16940 66.019 1.95e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149803g00001 K21596 - gmx:100793970 173.711