Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149774g00001 ATGGTTAGTTCCGTAAGTTTAGAAGGGTATGCCTCAGGGACAGCACGTGGAGGAGTTCCCTCAGCACGCATTGCTATCTACAAAGCGTGTTGGGGAAAAGTTTGCAGTGATTGTGATATCCTTGCGGCTTTTGATGCAGCAATTGCTGATGGCGTTGATGTTCTTTCTGTTTCTATTGGACTAACTCAACCAACATTGTTTAACTATTTTCAATTTTCAATCAACATTGGGAGTTTCCATGCAATGCAAAGAGGTGTATTTACGTCGAATGCCGCTGGTAATTCGGGCCCTGTTCCTGTCACTATGTCAGTTTATGCACCTTGGTTACTTTCCGTAGCTGCTAGCACATTTGGCAGAAAATTTGCTACAAAGGTGAAATTGGGAAATGGTGTCATTTATGAG 402 0.4279 MVSSVSLEGYASGTARGGVPSARIAIYKACWGKVCSDCDILAAFDAAIADGVDVLSVSIGLTQPTLFNYFQFSINIGSFHAMQRGVFTSNAAGNSGPVPVTMSVYAPWLLSVAASTFGRKFATKVKLGNGVIYE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149774g00001 134 Gene3D Peptidase S8/S53 domain 2 117 IPR036852 GO:0004252|GO:0006508
Trme149774g00001 134 Gene3D - 118 132 - -
Trme149774g00001 134 ProSiteProfiles Serine proteases, subtilase domain profile. 1 134 - -
Trme149774g00001 134 SUPERFAMILY Subtilisin-like 12 131 IPR036852 GO:0004252|GO:0006508
Trme149774g00001 134 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 130 IPR045051 -
Trme149774g00001 134 Pfam Subtilase family 15 116 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme149774g00001 Trme-Chr149774 120 521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149774g00001 2 131 Subtilisin-like Serine Gene Family AT5G03620 58.462 8.70e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149774g00001 - - lja:Lj2g3v3087930.1 179.874