Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149664g00001 ATGTTTGCTGCTGGTAGCGAAACATCGTCGGGGATTGTCTTATGGGGGATGTCACAAATTATAAAGAATCCAAAGGTAATGGAAGAAGCACAAGTTGAGGTTAGAAGAGTGTTTGATAAAAAGGGACATGTCGATGAGACAGAGTTGCACCAGTTGATATACTTAAAGTCTATCATTAAAGAGACACTGAGATTGCATCCTACTGTACCATTGTTGCTTCCAAGAGAAAGTAGGGAGAGATGCCAAATCAATGGGTATGATATTCCAGCTAAGACAAGGGTTGCTGTCAATGTTTGGGCAATTGGAAGAGATCAAAG 317 0.4069 MFAAGSETSSGIVLWGMSQIIKNPKVMEEAQVEVRRVFDKKGHVDETELHQLIYLKSIIKETLRLHPTVPLLLPRESRERCQINGYDIPAKTRVAVNVWAIGRDQ 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149664g00001 105 PRINTS E-class P450 group I signature 97 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 PANTHER CYTOCHROME P450 71B11-RELATED 1 104 - -
Trme149664g00001 105 Pfam Cytochrome P450 1 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 Gene3D Cytochrome P450 1 105 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme149664g00001 105 SUPERFAMILY Cytochrome P450 1 104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme149664g00001 Trme-Chr149664 16 332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149664g00001 1 104 Cytochrome P450 AT3G26830 53.333 2.48e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149664g00001 - - vvo:131619653 182.185