Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149596g00001 CTTGACATTCCAGCTCAATCGCAATGTCTTCTTCACATGGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAAGTATGAAAAAATTGGTGAGTCAACTGAAGTAGCACTACGTGTTTTGGTAGAAAAGGTCGGTCTCCCTGGTTTTAATTCTATGCCGTCAGCATTGAATATGTTGAGCAAGCATGAGCGTGCTTCTTACTGTAACCACTATTGGGAAGAACAATTTAGAAAGTTGATCTGA 267 0.4045 LDIPAQSQCLLHMAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVLVEKVGLPGFNSMPSALNMLSKHERASYCNHYWEEQFRKLI 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149596g00001 88 Gene3D - 2 88 IPR023299 GO:0000166
Trme149596g00001 88 Pfam Cation transport ATPase (P-type) 18 66 - -
Trme149596g00001 88 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 4 86 IPR023299 GO:0000166
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149596g00001 1 87 Primary Pumps ATPases(2) AT1G10130 83.908 1.01e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149596g00001 K05853 - gmx:100783509 170.629