Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149518g00001 GGTGCTGATACTGTAATCTATGAGAGACTGTCTGATTCTAACAACGATATCAAGAAAATCACCAGGGAGTATTTGGAGCAATTTGGATCTTCTGGACTACGTACATTATGCCTGGCTTACAGAGAATTGCATCCAAATGTTTACGAAAGTTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTACAGGATCGTGAAAAGAAATTAGACGAGGTACAGTTTATCATAACATGGAAGCTTTTNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNTAAGTAG 300 0.32 GADTVIYERLSDSNNDIKKITREYLEQFGSSGLRTLCLAYRELHPNVYESWNEKFIQAKSSLQDREKKLDEVQFIITWKLXXXXXXXXXXXXXXXXXXK 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149518g00001 99 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 73 - -
Trme149518g00001 99 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 7 52 IPR023299 GO:0000166
Trme149518g00001 99 Gene3D - 1 75 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme149518g00001 Trme-Chr149518 54 353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149518g00001 1 76 Primary Pumps ATPases AT1G59820 69.737 2.38e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149518g00001 K14802 - gmx:100787473 133.265