Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149130g00001 ATGGATCCAATTCCAACCTATCCAGAAATCTCCATAGATGTTCCTCCTTACCTTCGTGTACACAAAAACGGAACCATAGAAAGATTAGCAGGCATTCATGTCGTTCCTCCCGGCATCGATCCTCAAACCAAAGTTATCTCCAAAGACATCACAATCATCCCAAAAACTGGTCTCACAGCAAGACTCTATTCACCCAACAATTCCACTTCAAAAAAACTACCTTTAATTATCTACTTCCATGGTGGAGCCTATTGTATATCTTCAGCCTCTGACCCACTTTACCATAACTCCCTCAACAAACTCGTACTCGAAGCAAACATCATCGCTATCTCTGTTAATTACCGGTTAGCACCGGAGCATCCTCTTCCAACCGCTTACAATGATTCTTGGGAAGCACTTCAATGGATTGCTTCACACACAATTGAAAATCATGAAGAAAATCATGAAAACTTGATCAAAGAAAGAGTTGACTTTAACAAAGTT 483 0.4037 MDPIPTYPEISIDVPPYLRVHKNGTIERLAGIHVVPPGIDPQTKVISKDITIIPKTGLTARLYSPNNSTSKKLPLIIYFHGGAYCISSASDPLYHNSLNKLVLEANIIAISVNYRLAPEHPLPTAYNDSWEALQWIASHTIENHEENHENLIKERVDFNKV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149130g00001 161 Gene3D alpha/beta hydrolase 17 161 IPR029058 -
Trme149130g00001 161 PANTHER ARYLACETAMIDE DEACETYLASE 13 161 - -
Trme149130g00001 161 Coils Coil 141 161 - -
Trme149130g00001 161 Pfam alpha/beta hydrolase fold 76 143 IPR013094 GO:0016787
Trme149130g00001 161 SUPERFAMILY alpha/beta-Hydrolases 5 139 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme149130g00001 Trme-Chr149130 66 548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149130g00001 16 161 Carbohydrate Esterase AT1G49640 47.020 1.74e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149130g00001 - - gmx:100786377 221.861