Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme149111g00001 ATGCCACCAGTGCCGCGTGGATGGAAAGGCCATTGTCAAAAAGGAGAAGCTTTCAATGCTTCATCTTGCAACAGGAAATTGATAGGAGCAAGATACTATATGAGTGGATATGAAGCAGAAGAAGGATCAGACAAAAAAGTCTCTTTCAGATCTCCAAGAGACAGCTCTGGTCATGGAAGTCATACAGCATCCACAGCAGCAGGACGATACGTGGCAGACATGAATTATAAGGGGTTGGCATCAGGAAAAGCAAGGGGAGGTGCACCTATGGCTAGAATTGCTGTTTACAAAACATGTTGGGATTCTGGTTGCTATGATGTGGATTTGTTAGCTGCCTTTGATGATGCCATAAGAGA 356 0.4438 MPPVPRGWKGHCQKGEAFNASSCNRKLIGARYYMSGYEAEEGSDKKVSFRSPRDSSGHGSHTASTAAGRYVADMNYKGLASGKARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIR 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme149111g00001 118 Gene3D Peptidase S8/S53 domain 1 117 IPR036852 GO:0004252|GO:0006508
Trme149111g00001 118 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 118 IPR045051 -
Trme149111g00001 118 MobiDBLite consensus disorder prediction 41 64 - -
Trme149111g00001 118 ProSiteProfiles Serine proteases, subtilase domain profile. 1 118 - -
Trme149111g00001 118 Pfam Subtilase family 40 117 IPR000209 GO:0006508|GO:0008236
Trme149111g00001 118 SUPERFAMILY Subtilisin-like 20 117 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme149111g00001 Trme-Chr149111 80 548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme149111g00001 3 117 Subtilisin-like Serine Gene Family AT3G14240 57.759 1.64e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme149111g00001 - - gmx:100780538 227.639