Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme148986g00001 ATGGATGTTTCTCATGGTTCACCTGGGCAAACTGACATTCCTTCAATTGCTGTGGTTGTAAGCTCGAGGAATTGGCCAATGATATCTAAATATAGGGCATGTGTCCGAACTCAAGGTTCGAAGGTGGAAATGATAGACAATTTGTTCAAGCCAGTGTCTGACAAGGAGGATGAAGGAATTCGAAGGGAGCTCTTGATTTATTTCTATACAAGTTCGGGGAACAGAAAACCCGACAATATTATCATTTTCAGGGATGGTGTCAGTGAGTCCCAGTTTAACCAAGTGTTGAACATTGAACTGAGCCAAATCATTGAGGCTTGTAAATTTCTGGATGAAACCTGGAACCCCAAATTTTTGGTGACTGTTGCCCAGAAGAATCATCACACAAAATTCTTCCAGCCTGGATCCCCAGACAATGTGTCGCCTGGAACTGTTGTTGACAACAAAGTTTGTCATCCTAGAAATTACAATTTCTGCTTCCCAGGTTGGACAGTTCATGAAGTTTGA 507 0.4201 MDVSHGSPGQTDIPSIAVVVSSRNWPMISKYRACVRTQGSKVEMIDNLFKPVSDKEDEGIRRELLIYFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDETWNPKFLVTVAQKNHHTKFFQPGSPDNVSPGTVVDNKVCHPRNYNFCFPGWTVHEV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme148986g00001 168 SUPERFAMILY Ribonuclease H-like 1 158 IPR012337 -
Trme148986g00001 168 Gene3D - 1 161 IPR036397 GO:0003676
Trme148986g00001 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 158 - -
Trme148986g00001 168 SMART Piwi_a_2 1 168 IPR003165 GO:0003676
Trme148986g00001 168 Pfam Piwi domain 1 158 IPR003165 GO:0003676
Trme148986g00001 168 ProSiteProfiles Piwi domain profile. 1 158 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme148986g00001 Trme-Chr148986 17 523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme148986g00001 2 158 Eukaryotic Initiation Factors Gene Family AT1G48410 44.379 2.51e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme148986g00001 K11593 - gmx:100779439 291.967