Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14887g00001 ATGGATCCACAACTTCTCTCCACCGCGGCAACTACCATTCCGCCTAATATCGTCCAACAAAATTATCCTGAATCAGTAGAGTCTTTATCATCGCCATCACCACCACAGCCACNACCACGATCACGTGAAATAATGAACGATGAGTCTTTACCTAATGTCCCCGGATCCAAGCTTCGTCTCATGTGCAGCTATGGCGGACACATTATGCCGCGCCCGCATGATAAATCCTTGTGTTATGTCGGTGGTGACACGCGAATTGTGGTGGTTGACCGGAGTGCTTCCCTGAGAGATCTTTGTTCTCGTCTTTCGAGAACAATTCTTAATGGAAGACCCTTTACTCTAAAATACCAGCTTCCAAATGAAGACCTTGATAACCTCATCACAGTAACATCAGATGAAGATCTTGATAATATGATCGAAGAATACGATCGAATAGCATCTTCATCAATGAAACCTTCATCTTCAAGACTCAGAGTGTTTCTTTTCTTCACAAAACCAGATTCTACTCTTTCAATGGGTTCTCTACTTGATGATGCAAAATCTGAAACATGGTTTGTTGATGCACTCAACAACTCAGGAATCCTCTCAAGGGGTGTTTCAGATTCAGAACGGGATTCTTTTGTGAATCTTGATAATGTTCCTGCTAGTGATTCAAGTAACAACTTGGAATCTCAAGGTGTAGTAGCAGCAGAGTCATTGAATATCCTTGAAGACACCAACAACAATAACAACAATGTTAAGAATGTTTTTGATGTTGTTAATGTTGCACCTGGTTCACCTATGCTTGAGAATAGTCCATCTTCATCTTCTTTGTCTCCTTCTATAGCTAATTTACCTCCGATTCGTGTTCGTGTTGA 857 0.4131 MDPQLLSTAATTIPPNIVQQNYPESVESLSSPSPPQPXPRSREIMNDESLPNVPGSKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRSASLRDLCSRLSRTILNGRPFTLKYQLPNEDLDNLITVTSDEDLDNMIEEYDRIASSSMKPSSSRLRVFLFFTKPDSTLSMGSLLDDAKSETWFVDALNNSGILSRGVSDSERDSFVNLDNVPASDSSNNLESQGVVAAESLNILEDTNNNNNNVKNVFDVVNVAPGSPMLENSPSSSSLSPSIANLPPIRVRV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14887g00001 285 CDD PB1_UP2 61 162 - -
Trme14887g00001 285 Pfam PB1 domain 73 162 IPR000270 GO:0005515
Trme14887g00001 285 SUPERFAMILY CAD & PB1 domains 73 173 - -
Trme14887g00001 285 Gene3D - 77 163 - -
Trme14887g00001 285 PANTHER OS05G0427100 PROTEIN-RELATED 22 284 - -
Trme14887g00001 285 MobiDBLite consensus disorder prediction 1 29 - -
Trme14887g00001 285 MobiDBLite consensus disorder prediction 1 50 - -
Trme14887g00001 285 SMART PB1_new 72 162 IPR000270 GO:0005515
Trme14887g00001 285 ProSiteProfiles PB1 domain profile. 57 162 IPR000270 GO:0005515
Trme14887g00001 285 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 77 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14887g00001 Trme-Chr14887 653 1509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14887g00001 57 191 MAP Kinase Kinase Kinase AT5G57610 44.853 5.24e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14887g00001 - - cam:101514979 384.03