Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14880g00001 GGAACTGATACAATTGAAGGCATTATGTTGGACATGCCTAACTTAAAACAAGAAGTCCAGTTAAAACCCAACACCTTTGATAATATGGGAAGGCTTAGAATCCTCATATTTAAGAATGGACAAGTTTCTGGAGCACCTCAAAATCTTCCAAATAATTTGAGATTGCTTGAGTGGAACAACTATCCTTTAACATCCCTACCTGATAATTTTCATCCAAAGACACTTGTTGTACTCAATTTGCCAAAGAGTCATATAGCAATGGATGAGCCATTCAAGGTCACAATCCAAATGTCCAGTCCTGGATGTGAAGGGGTGCGTTAA 321 0.3832 GTDTIEGIMLDMPNLKQEVQLKPNTFDNMGRLRILIFKNGQVSGAPQNLPNNLRLLEWNNYPLTSLPDNFHPKTLVVLNLPKSHIAMDEPFKVTIQMSSPGCEGVR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14880g00001 106 SUPERFAMILY L domain-like 19 86 - -
Trme14880g00001 106 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 86 IPR044974 GO:0006952
Trme14880g00001 106 Gene3D Ribonuclease Inhibitor 6 99 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14880g00001 Trme-Chr14880 111 634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14880g00001 1 83 WRKY Transcription Factor Family AT4G12020 49.451 1.56e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14880g00001 - - pcin:129293148 123.635