Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme148648g00001 GTCAGCAGTGTCAAGCTTGCCCCTCTTTTTGTTGAACCGGATTCCCGTCTTGGCGACTTTGGCTTTGTTACCTTTGTCAACAAGGAAGATGCTGAGCGGGCTATGGAAGAACTCAATGCCTCTGGCCCACGTGGCAGGGATAAACGCACCCTTAAACTTGATTGGGTCTCCAACCTAAAAAAATCAACCTAA 192 0.4844 VSSVKLAPLFVEPDSRLGDFGFVTFVNKEDAERAMEELNASGPRGRDKRTLKLDWVSNLKKST 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme148648g00001 63 Gene3D - 1 57 IPR012677 -
Trme148648g00001 63 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 44 IPR000504 GO:0003723
Trme148648g00001 63 SUPERFAMILY RNA-binding domain, RBD 19 58 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme148648g00001 Trme-Chr148648 294 485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme148648g00001 9 57 Eukaryotic Initiation Factors Gene Family AT3G11400 38.462 6.70e-06 39.7