Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14861g00001 GTTGTTCAAGATGATATAATGTTGTGGCCATTCAAGGTCACTGCCGGTGTCGATGACAAACCCATGATTACTGTCACATACAAGGGTCAGGAGAAGAAGCTTTGTGCAGAAGAAGTGTCATCTATGGTACTCACTAAGATGCGAGAAATTGCGGAGGCGTATTTAGAATCACCTGTTAAGAATGCAGTTGTTACTGTCCCTGCTTATTTTAGTGATTCTCAGCGAAAAGCCACCGTAGATGCGGGTGCTATTGCTGGCCTCAATGTTATGAGGGTAATGAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGATAAGAGATCTAACTGTGTTGGAGAAAGAAATATTTTTGTCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCAGCTAACGATAAAGGATAATGTCTTCCAAGTTAAGGCAACTGCCGGAAACACTCACCTTGGTGGAGAGGACTTTGATAATAGAATGGTGAACTACTTTGTACAAGAGTTTAAGAGAAAGAACAACGTGGACATTAGTGGAAATCCAAGGGCCTTAAGGAGGTTGAGAACAGCTTGTGAGAGAGCTAAAAGTTCACTTTATTTCCTTGTTGTCTCAACTATTGAGATTGATTCTTTATTTGAAGGCATTGATTTTTCTTCATCAATCAATCGTGCCAAGTTTGAAGAAATGAATATGGATCTTTTCGAGGATTGTATGAAGATTGTTGCGAGTTGTCTTACAGATGCTAACTTGGACAAGAGTAAGGTTGATGATGTTGTCCTTGTTGGTGGGTGTTCTAGGATTCCTAAAGTGCAACAGCTGTTACAGGAATTTTTCAAGGGGAAGGAGTTGTGCAAGAGCATTAACCCTGATGAGGCTGTAGCTTTTGGGGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGACGTTAAGAATGTTCCAAAGTTGGTGTTGCAGGATGTTACACCTTTGTCTCTTGGTAGATCAATACAAGGAGATATCATGCATGTGGTGATTCCCAGGAACACTTGCATTCCTGTCAAGAAGACAAATCAATATTTCTCAACTGTTGATAATATACTCAGTTCCAAGATAAAGGTTTATGAGGGTGAGAGAACAAGTGCCAGTGACAACAATTTGCTTGGTTCTTTTATACTTTCCGGCATCCCCCCTGGTCCCCGTGGTTCCCCTTCTTCAAATGTTTGTTTTGCTATTGATGAAAATGGTATTTTGACAGTTTCTGCTACAAATAATGCTTCTGGAAATTCGAATGAGATTACAATAACCAATTACAAAGAAAGGTTGTCAGCTGAAGAAATTAAAAAATTGATTCAGGAAGCTGAGAATTACCATATTGAAGACATGAAATTCCTAAAGAAGACCGAAGCTGTGAATGCATTGGATGATTACATTTACAAAATGAGAAATAGTTTAAAAACAGAGGATATTAATTTGAAGCTCTCTGCTGAAGAAATCAAGAAAATTGAAGATGCAATTGCGGTGGCCACAAATTTTGTTGA 1508 0.3939 VVQDDIMLWPFKVTAGVDDKPMITVTYKGQEKKLCAEEVSSMVLTKMREIAEAYLESPVKNAVVTVPAYFSDSQRKATVDAGAIAGLNVMRVMNEPTAAAIAYGLDKRSNCVGERNIFVFDLGGGTFDVSQLTIKDNVFQVKATAGNTHLGGEDFDNRMVNYFVQEFKRKNNVDISGNPRALRRLRTACERAKSSLYFLVVSTIEIDSLFEGIDFSSSINRAKFEEMNMDLFEDCMKIVASCLTDANLDKSKVDDVVLVGGCSRIPKVQQLLQEFFKGKELCKSINPDEAVAFGAAVQAALLSEDVKNVPKLVLQDVTPLSLGRSIQGDIMHVVIPRNTCIPVKKTNQYFSTVDNILSSKIKVYEGERTSASDNNLLGSFILSGIPPGPRGSPSSNVCFAIDENGILTVSATNNASGNSNEITITNYKERLSAEEIKKLIQEAENYHIEDMKFLKKTEAVNALDDYIYKMRNSLKTEDINLKLSAEEIKKIEDAIAVATNFV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14861g00001 502 Pfam Hsp70 protein 2 496 IPR013126 GO:0005524|GO:0140662
Trme14861g00001 502 PRINTS 70kDa heat shock protein signature 125 135 - -
Trme14861g00001 502 PRINTS 70kDa heat shock protein signature 285 305 - -
Trme14861g00001 502 PRINTS 70kDa heat shock protein signature 62 82 - -
Trme14861g00001 502 PRINTS 70kDa heat shock protein signature 392 408 - -
Trme14861g00001 502 PRINTS 70kDa heat shock protein signature 311 330 - -
Trme14861g00001 502 PRINTS 70kDa heat shock protein signature 253 269 - -
Trme14861g00001 502 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 458 499 IPR029048 -
Trme14861g00001 502 ProSitePatterns Heat shock hsp70 proteins family signature 3. 256 270 IPR018181 -
Trme14861g00001 502 Gene3D Actin; Chain A, domain 4 155 233 - -
Trme14861g00001 502 FunFam Heat shock 70 kDa 151 234 - -
Trme14861g00001 502 Gene3D - 460 502 IPR029048 -
Trme14861g00001 502 PANTHER HEAT SHOCK PROTEIN 70KDA 2 495 IPR013126 GO:0005524|GO:0140662
Trme14861g00001 502 FunFam Heat shock protein ssb1 1 42 - -
Trme14861g00001 502 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 306 459 IPR029047 -
Trme14861g00001 502 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 308 464 IPR029047 -
Trme14861g00001 502 SUPERFAMILY Actin-like ATPase domain 114 303 IPR043129 -
Trme14861g00001 502 FunFam Heat shock 70 kDa protein 305 462 - -
Trme14861g00001 502 FunFam Endoplasmic reticulum chaperone BiP 12 118 - -
Trme14861g00001 502 SUPERFAMILY Actin-like ATPase domain 2 107 IPR043129 -
Trme14861g00001 502 Gene3D - 115 282 - -
Trme14861g00001 502 Gene3D - 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14861g00001 Trme-Chr14861 3 1510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14861g00001 2 502 Calmodulin-binding Proteins AT3G12580 67.197 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14861g00001 K03283 - vvo:131625172 709.909