Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme148561g00001 ATGACAAAACTCTTCTCGGTTTTGGTTATCTGTGTGATTATCTTTACTCACCAAACAACCGCGGAGCAAGTCAAAGAGAATGAAGAAATCAACAAGGTATGCAGTTTTGCGCGATCAACAAACAGAAAACTTTGTCTCGAAGTTCTTAAATCAGACCCAAAATCTGCAACTGCAGACCTTACAGATTTAGCAATAATAGCACTACGTGTAGCAGCTAAAAATGCTTCCGGCATTTTAACCGATGTGAAGAGTTTGATCGACGACCCTGATCTAGACCCCGAAATTCAACAAGGTTTGGCTGATTGTAAAGAAACAATATTAGATGCTGAGTCTCAACTTGAAGACACTATTGCTGCTTTGTTGGTTGAATCTGAWGTTGATGCTCAGACATGGTTGAAAGCTGCTTTGGCTGCTATTACTACATGCGATGATTCGATTCCTGGGAACGATGATATTTTGTCTGTCAAGAGTACAACTTTCCGCAATCTCTGCAACATTGTTGTTGTTATTACCAAGGCATTGCCTAA 527 0.4004 MTKLFSVLVICVIIFTHQTTAEQVKENEEINKVCSFARSTNRKLCLEVLKSDPKSATADLTDLAIIALRVAAKNASGILTDVKSLIDDPDLDPEIQQGLADCKETILDAESQLEDTIAALLVESXVDAQTWLKAALAAITTCDDSIPGNDDILSVKSTTFRNLCNIVVVITKALP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme148561g00001 175 PANTHER PECTINESTERASE INHIBITOR-LIKE 1 174 - -
Trme148561g00001 175 CDD PMEI-like_1 30 174 - -
Trme148561g00001 175 NCBIfam pectinesterase inhibitor domain 4 173 IPR006501 GO:0004857
Trme148561g00001 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 174 IPR035513 -
Trme148561g00001 175 SMART PMEI_2 25 170 IPR006501 GO:0004857
Trme148561g00001 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 174 IPR035513 -
Trme148561g00001 175 Pfam Plant invertase/pectin methylesterase inhibitor 30 167 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme148561g00001 Trme-Chr148561 1 527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme148561g00001 25 152 Carbohydrate Esterase AT5G53370 28.788 1.24e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme148561g00001 - - gmx:102667060 221.861