Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme148164g00001 ATGAGAAGTGTAGAGTTTAAGGTCATTGAAACTAATCCTGGGGAGTACTGTGTGGTTGCTCCAGACACCGAGGTCTTCTGCGAGGGGGAACCTGTGAAAAGAGAGGATGAAGATAGGCTTGATGAAGTCGGTTATGATGATGTGGGTGGTGTTAGGAAGCAAATGGCACANNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTTTAAGTCAATTGGTGTGAAACCACCCAAAGGAATTTTGCTATATGGACCCCCGGGTTCTGGAAAGACATTAATAGCAAGAGTTGTTGCTAATGAAACTGGAGCTTTCTTCTTTTGTATCAATGGACCAGAGATTATGTCCAAACTGGCTAGAGAGAGTGAAAGCAATCTTAGTAAAGCATTTGAGGAAGCTGAAAAAAATGCACCGTCCATCATCTTTATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACAC 475 0.3853 MRSVEFKVIETNPGEYCVVAPDTEVFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAXXXXXXXXXXXXXXXFKSIGVKPPKGILLYGPPGSGKTLIARVVANETGAFFFCINGPEIMSKLARESESNLSKAFEEAEKNAPSIIFIDEIDSIAPKREKT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme148164g00001 158 Gene3D - 1 46 - -
Trme148164g00001 158 PANTHER AAA-FAMILY ATPASE 38 155 - -
Trme148164g00001 158 Gene3D - 47 157 IPR027417 -
Trme148164g00001 158 SUPERFAMILY Cdc48 domain 2-like 1 42 IPR029067 -
Trme148164g00001 158 Pfam ATPase family associated with various cellular activities (AAA) 83 155 IPR003959 GO:0005524|GO:0016887
Trme148164g00001 158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 155 IPR027417 -
Trme148164g00001 158 FunFam Transitional endoplasmic reticulum ATPase 44 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme148164g00001 Trme-Chr148164 1 475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme148164g00001 42 157 Calmodulin-binding Proteins AT3G56690 44.828 4.47e-26 101