Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme148091g00001 ATGGACATGATTCTGGGAATGCTTTTGAAAAATGCAGTGTTGAATGATTGGTCACTCAATGCTCTAAATGAAGATGAAGTCGTGAATATGCTGGAATCAGATGGATTTCCGATGGTACTTGCAAGGCATTGCTTGCATGTATATGGCAAGCAAGTAAAAGAAAATGATTGCATGGAAAGCTGTGTGTGGAAGTTGGATGAAAAGCGGGTATGCATACACTTTGCAAGAGAAATCCTGAAAGGAGGTAAGAGGAAGTTAGAGAGTTTTATGGATGAATGGAGGAACAAGACTCCAGATGAAATGCATCCCACTTTTGATCTTATGGAAGGAGAGGTATTGACAGAGAAAATCGGAGTTGAGACATGGGTCCGTGCCTTCCGTGTGTCTTCTTTGCCTTCCACTCCAGCTGAACGTTTCTCCATTCTTTTCAGAGAGCGTGCGAAATGGGATTGGAAAGATCTGCAGCCCTATATCAGGTTTA 481 0.4241 MDMILGMLLKNAVLNDWSLNALNEDEVVNMLESDGFPMVLARHCLHVYGKQVKENDCMESCVWKLDEKRVCIHFAREILKGGKRKLESFMDEWRNKTPDEMHPTFDLMEGEVLTEKIGVETWVRAFRVSSLPSTPAERFSILFRERAKWDWKDLQPYIRF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme148091g00001 160 Pfam Sister chromatid cohesion protein Dcc1 2 158 IPR019128 GO:0007064|GO:0031390
Trme148091g00001 160 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 1 159 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme148091g00001 1 159 C3H Transcription Factor Family AT2G44580 59.119 1.84e-62 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme148091g00001 K11271 - gmx:100817511 289.656