Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme147725g00001 ATGATATCAAACCGCGAGTCAGCGCGTAGGTCACGAATGAGGAAACAAAAACAACTTGATGAGCTTTGGTCACAAGTTGTTTGGCTAAGGAATGAGAATCATCAACTACTTGATAAGCTTAACAATTTCTCAGAAACTCATGATAGAGTTGTTCAAGAGAATGTTCAATTGAAAGAAGAAGCTTCGGAACTTCGACAAATG 201 0.3831 MISNRESARRSRMRKQKQLDELWSQVVWLRNENHQLLDKLNNFSETHDRVVQENVQLKEEASELRQM 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme147725g00001 67 CDD bZIP_plant_GBF1 1 48 IPR045314 GO:0003700|GO:0006355
Trme147725g00001 67 FunFam BZIP transcription factor 1 47 - -
Trme147725g00001 67 Coils Coil 40 67 - -
Trme147725g00001 67 SUPERFAMILY Leucine zipper domain 1 45 IPR046347 GO:0003700|GO:0006355
Trme147725g00001 67 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 67 IPR044521 -
Trme147725g00001 67 Gene3D - 1 49 - -
Trme147725g00001 67 SMART brlzneu 1 56 IPR004827 GO:0003700|GO:0006355
Trme147725g00001 67 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 57 IPR004827 GO:0003700|GO:0006355
Trme147725g00001 67 Pfam bZIP transcription factor 1 46 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme147725g00001 Trme-Chr147725 35 235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme147725g00001 1 67 bZIP Transcription Factor Family AT3G30530 80.597 3.95e-34 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme147725g00001 bZIP_1 4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme147725g00001 - - adu:107486353 127.487