Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme147633g00001 ATGGAAAAAATTGAGGAAACTGGCCGTCGTCTTGCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTTTAATGCCATAGCATCGCGGAATTGGGAAACAATTCGAGTTGAAGATCTTAAAATTGGGAGCAATGAGGTAGTTGTTGTGAACACTTTGATGAGGTTTAAGAATTTACTGGATGAAAGTATTGAAGTGAACAGTCCAAGAAACGCGGTTCTGCAATTGATCAGGAAGATAAACCCTGCTATTTTTACTCAGTCCATTATTAATGGATCATATAATTCGCCTTTCTTTGCTACACGGTTTAGGGAGGCACTGTTTCATTTTTCAGCTCTTTTTGATATGTTTGACACTGTCATACCGCGCGAAAACGAACATAGGATGATGATGGAGAAGGAAAG 404 0.3911 MEKIEETGRRLANYCKRFNVPFEFNAIASRNWETIRVEDLKIGSNEVVVVNTLMRFKNLLDESIEVNSPRNAVLQLIRKINPAIFTQSIINGSYNSPFFATRFREALFHFSALFDMFDTVIPRENEHRMMMEKE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme147633g00001 134 ProSiteProfiles GRAS family profile. 1 134 IPR005202 -
Trme147633g00001 134 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 133 IPR005202 -
Trme147633g00001 134 Pfam GRAS domain family 2 134 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme147633g00001 Trme-Chr147633 1 404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme147633g00001 2 134 GRAS Transcription Factor Family AT1G07530 65.414 6.78e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme147633g00001 GRAS 1.5e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme147633g00001 - - tpra:123918580 224.942